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Authors and Citation

Authors

  • Jacob S. Berv. Author, maintainer, copyright holder, funder.

  • Nathan Fox. Author.

  • Matt J. Thorstensen. Author.

  • Henry Lloyd-Laney. Author.

  • Emily M. Troyer. Author.

  • Rafael A. Rivero-Vega. Author.

  • Stephen A. Smith. Author, funder.

  • Matt Friedman. Author, funder.

  • David F. Fouhey. Author, funder.

  • Brian C. Weeks. Author, funder.

Citation

Source: inst/CITATION

Berv JS, Probst CM, Claramunt S, Shipley JR, Friedman M, Smith SA, Fouhey DF, Weeks BC (2026). “Rates of passerine body plan evolution in time and space.” Nature Ecology & Evolution. In press. 

@Article{,
  title = {Rates of passerine body plan evolution in time and space},
  author = {Jacob S. Berv and Charlotte M. Probst and Santiago Claramunt and J. Ryan Shipley and Matt Friedman and Stephen A. Smith and David F. Fouhey and Brian C. Weeks},
  year = {2026},
  journal = {Nature Ecology & Evolution},
  note = {In press.},
}

Berv JS, Fox N, Thorstensen MJ, Lloyd-Laney H, Troyer EM, Rivero-Vega RA, Smith SA, Friedman M, Fouhey DF, Weeks BC (2026). “bifrost: an R package for scalable inference of phylogenetic shifts in multivariate evolutionary dynamics.” bioRxiv. doi:10.64898/2026.04.12.718036, Preprint version 1. 

@Article{,
  title = {bifrost: an R package for scalable inference of phylogenetic shifts in multivariate evolutionary dynamics},
  author = {Jacob S. Berv and Nathan Fox and Matt J. Thorstensen and Henry Lloyd-Laney and Emily M. Troyer and Rafael A. Rivero-Vega and Stephen A. Smith and Matt Friedman and David F. Fouhey and Brian C. Weeks},
  year = {2026},
  journal = {bioRxiv},
  doi = {10.64898/2026.04.12.718036},
  note = {Preprint version 1.},
}

Berv JS, Fox N, Thorstensen MJ, Lloyd-Laney H, Troyer EM, Rivero-Vega RA, Smith SA, Friedman M, Fouhey DF, Weeks BC (2026). Branch-Level Inference Framework for Recognizing Optimal Shifts in Traits. R package version 0.1.4, https://CRAN.R-project.org/package=bifrost. 

@Manual{,
  title = {Branch-Level Inference Framework for Recognizing Optimal Shifts in Traits},
  author = {Jacob S. Berv and Nathan Fox and Matt J. Thorstensen and Henry Lloyd-Laney and Emily M. Troyer and Rafael A. Rivero-Vega and Stephen A. Smith and Matt Friedman and David F. Fouhey and Brian C. Weeks},
  year = {2026},
  note = {R package version 0.1.4},
  url = {https://CRAN.R-project.org/package=bifrost},
}

Clavel J, Escarguel G, Merceron G (2015). “mvmorph: an R package for fitting multivariate evolutionary models to morphometric data.” Methods in Ecology and Evolution, 6(11), 1311-1319. doi:10.1111/2041-210X.12420. 

@Article{,
  title = {mvmorph: an R package for fitting multivariate evolutionary models to morphometric data},
  author = {Julien Clavel and Gilles Escarguel and Gildas Merceron},
  year = {2015},
  journal = {Methods in Ecology and Evolution},
  volume = {6},
  number = {11},
  pages = {1311-1319},
  doi = {10.1111/2041-210X.12420},
}

Clavel J, Aristide L, Morlon H (2019). “A Penalized Likelihood Framework for High-Dimensional Phylogenetic Comparative Methods and an Application to New-World Monkeys Brain Evolution.” Systematic Biology, 68(1), 93-116. doi:10.1093/sysbio/syy045. 

@Article{,
  title = {A Penalized Likelihood Framework for High-Dimensional Phylogenetic Comparative Methods and an Application to New-World Monkeys Brain Evolution},
  author = {Julien Clavel and Leandro Aristide and Hélène Morlon},
  year = {2019},
  journal = {Systematic Biology},
  volume = {68},
  number = {1},
  pages = {93-116},
  doi = {10.1093/sysbio/syy045},
}